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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank114Aligned Residues240
% Identity24%Templatec2zv2A_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase kinase 2; PDBTitle: crystal structure of human calcium/calmodulin-dependent protein kinase2 kinase 2, beta, camkk2 kinase domain in complex with sto-609
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410... ......420.........430.........440.........
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Query Sequence  EEITLLKELGNGQFGVVQLGQWK. GQYDVAVKMIKEGAMSEDEFFQEAQTMMKLSHPKLV
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Template Sequence  NQYTLKDEI. . GKYGVVKLAYNENDNTYYAMKVLSKK. . . . EQVYQEIAILKKLDHPNVV
Template Known Secondary structure  TT..


TTTT

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   164.....170.. .......180.........190........ .200.........210.......
 
   450........ .460.........470.........480.........490.........500.......
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Query Sequence  KFYGVCSKK. . YPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEGMAFLESHQ
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Template Sequence  KLVEVLDDPNEDHLYMVFELVNQGPVMEVP. . TLKPLSEDQARFYFQDLIKGIEYLHYQK
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SSSS

TT
BS

SS..
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TT
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   251........260.........270.........280 .........290.........300........
 
   508.510.........520.........530.........540.........550.........560....
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Query Sequence  FIHRDLAARNCLVDSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK. . .
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Template Sequence  IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV. GTPAFMAPESLSETRKIF
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GGG
TTS



TT

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.S
GGG

GGG

TT


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   309310.........320.........330.........340......... 350.........360.......
 
   565....570.........580.........590.........600.... .....610.........620...
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Query Sequence  YSSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQG. HRLYRPQLASDTIYQIMYS
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Template Sequence  SGKALDVWAMGVTLYCFVF. GQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITR
Template Known Secondary structure  S.SS
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   368.370.........380...... ...390.........400.........410.........420......
 
   624.....630.........640
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Query Sequence  CWHELPEKRPTFQQLLS
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Template Sequence  MLDKNPESRIVVPEIKL
Template Known Secondary structure  T
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TTTS

TT
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   427..430.........440...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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