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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank105Aligned Residues235
% Identity22%Templatec2wqmA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase nek7; PDBTitle: structure of apo human nek7
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410... ......420......... 430.........440.....
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Query Sequence  EEITLLKELGNGQFGVVQLGQWK. GQYDVAVKMIKEGAMS. . . . EDEFFQEAQTMMKLSH
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Template Sequence  ANFRIEKKIGRG. . SEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH
Template Known Secondary structure  GG

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TTT


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   32.......40... ......50.........60.........70.........80.........
 
   446...450.........460.........470........ .480.........490.........500..
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Query Sequence  PKLVKFYGVCSKKYPIYIVTEYITNGCLLNYLK. . . SHGKGLESCQLLEMCYDVCEGMAF
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Template Sequence  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH
Template Known Secondary structure  TTB

TT


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   92.......100.........110.........120.........130.........140.........150.
 
   503......510.........520.........530.........540.........550.........560..
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Query Sequence  LESHQFIHRDLAARNCLVDSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHY
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Template Sequence  MHSRRVMHRDIKPANVFITATGVVKLGDL. . . . . . . . . . . . . . . . . . . TPYYMSPERIHE
Template Known Secondary structure  TT






GGG
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   152.......160.........170.........180 .........190..
 
   563......570.........580.........590.........600.........610.........620..
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Query Sequence  FKYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQGHRLYRPQLASDTIYQIMY
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Template Sequence  NGYNFKSDIWSLGCLLYEMAA. LQSPFYMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVN
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   211........220.........230. ........240.........250.........260.........
 
   623......630.........640.......
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Query Sequence  SCWHELPEKRPTFQQLLSAIEPLRE
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Template Sequence  MCINPDPEKRPDVTYVYDVAKRMHA
Template Known Secondary structure  T
SSGGGS

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   273......280.........290.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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