Job Description P97504 Confidence 100.00% Date Wed Jul 10 14:16:15 BST 2013 Rank 214 Aligned Residues 259 % Identity 17% Template c2v62A_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase vrk2; PDBTitle: structure of vaccinia-related kinase 2 Resolution 1.7 Å

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		390	.	.	.	.	.	.	.	.	.	400	.					.	.	.	.	.	.	.	.	410	.	.	.		.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure														.	.	.	.													.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.													.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	E	I	T	L	L	K	E	L	G	N	.	.	.	.	G	Q	F	G	V	V	Q	L	G	Q	W	K	.	G	Q	Y	D	V	A	V	K	M	I	K	E	G	A	M	S	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.													.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.													.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	G	K	V	L	D	D	M	E	G	N	Q	W	V	L	G	K	K	I	L	I	Y	L	A	F	P	T	N	K	P	E	K	D	A	R	H	V	V	K	V	E	Y	Q	E	G	P	L	F	S	E	L	K	F	Y	Q	R	V	A	K
Template Known Secondary structure			T	T						T	T	S																	S	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
			432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.					.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure		.																									.	.	.	.
Query SS confidence		.																									.	.	.	.
Query Sequence		.	E	F	F	Q	E	A	Q	T	M	M	K	L	S	H	P	K	L	V	K	F	Y	G	V	C	.	.	.	.	S	K	K	Y	P	I	Y	I	V	T	E	Y	I	T	N	G	C	L	L	N	Y	L	K	S	H	G	K	G	L	E	S
Query Conservation		.																									.	.	.	.
Alig confidence		.																									.	.	.	.														.														.
Template Conservation																																												.														.
Template Sequence		K	D	C	I	K	K	W	I	E	R	K	Q	L	D	Y	L	G	I	P	L	F	Y	G	S	G	L	T	E	F	K	G	R	S	Y	R	F	M	V	M	E	R	L	.	G	I	D	L	Q	K	I	S	G	Q	N	G	T	.	F	K	K
Template Known Secondary structure													T		S															S	S	S												.									B	G	G	G	B	.
Template Predicted Secondary structure																																												.														.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520			.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		C	Q	L	L	E	M	C	Y	D	V	C	E	G	M	A	F	L	E	S	H	Q	F	I	H	R	D	L	A	A	R	N	C	L	V	.	.	D	S	D	L	S	V	K	V	S	D	F	G	M	T	R	Y	V	L	D	D	Q	Y	V	S
Query Conservation																																				.	.
Alig confidence																																				.	.
Template Conservation
Template Sequence		S	T	V	L	Q	L	G	I	R	M	L	D	V	L	E	Y	I	H	E	N	E	Y	V	H	G	D	I	K	A	A	N	L	L	L	G	Y	K	N	P	D	Q	V	Y	L	A	D	Y	G	L	S	Y	R	Y	C	P	N	G	N	H	K
Template Known Secondary structure																					T	T				S			S	G	G	G					S	S	S	T	T	S							T	T				S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		545	.	.	.							.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.
Query Sequence		S	V	G	T	.	.	.	.	.	.	K	F	P	V	K	W	S	A	P	E	V	F	H	Y	F	K	Y	S	S	K	S	D	V	W	A	F	G	I	L	M	W	E	V	F	S	L	G	K	Q	P	Y	D	L	Y	D	N	S	E	V	V
Query Conservation						.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																																				.
Template Conservation																																															.
Template Sequence		Q	Y	Q	E	N	P	R	K	G	H	N	G	T	I	E	F	T	S	L	D	A	H	K	G	V	A	L	S	R	R	S	D	V	E	I	L	G	Y	C	M	L	R	W	L	C	.	G	K	L	P	W	E	Q	N	L	K	D	P	V	A
Template Known Secondary structure							G	G	G		S		S		T	T	T								T																						.	S	S		T	T	G	G	G	T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.
		599	600	.	.	.	.	.	.	.	.	.											610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	V	S	Q	G	H	R	L	Y	R	.	.	.	.	.	.	.	.	.	.	P	Q	L	A	S	D	T	I	Y	Q	I	M	Y	S	C	W	H	E	L	P	E	K	R	P	T	F	Q	Q	L	L	S	A	I	E	P	L	R	E	Q
Query Conservation													.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	T	A	K	T	N	L	L	D	E	L	P	Q	S	V	L	K	W	A	P	S	G	S	S	C	C	E	I	A	Q	F	L	V	C	A	H	S	L	A	Y	D	E	K	P	N	Y	Q	A	L	K	K	I	L	N	P	H	G	I	P
Template Known Secondary structure												T	T	T							S		T	T	S														T			T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		649	650	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D