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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank244Aligned Residues258
% Identity24%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410.........420.........430 .........440.........
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Query Sequence  EEITLLKELGNGQFGVVQLGQWKGQYDVAVKMIKEGAMSE. DEFFQEAQTMMKLSHPKLV
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Template Sequence  NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLV
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B
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   3940.........50.........60.........70.........80.........90........
 
   450.........460.........470.........480.. .......490.........500......
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Query Sequence  KFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGK. . . GLESCQLLEMCYDVCEGMAFLESH
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Template Sequence  SLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR
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TT
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   99100.........110.........120.........130.........140.........150........
 
   507..510.........520.........530.........540.........550.........560......
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Query Sequence  QFIHRDLAARNCLVDSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS
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Template Sequence  AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLVVKGTLG. YIDPEYFIKGRLT
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   159160.........170.........180.........190.........200.... .....210.......
 
   567..570.........580.........590.........600... ......610
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Query Sequence  SKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQ. . . . . . . . . . . . . . . . GHRLYRP
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Template Sequence  EKSDVYSFGVVLFEVLC. ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR
Template Known Secondary structure  T.

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TTTT


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   220.........230...... ...240.........250.........260.........270........
 
   611........620.........630.........640.........650
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Query Sequence  QLASDTIYQIMYSCWHELPEKRPTFQQLLSAIEPLREQDK
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Template Sequence  PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE
Template Known Secondary structure  T
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   279280.........290.........300.........310........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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