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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank91Aligned Residues245
% Identity23%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410... ......420... ......430.........440........
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Query Sequence  EEITLLKELGNGQFGVVQLGQWK. GQYDVAVKMI. KEGAMSEDEFFQEAQTMMKLSHPKL
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Template Sequence  QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI
Template Known Secondary structure  TTTTT

TTT
S
TT

BTTB
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   26...30.........40.........50.........60.........70.........80.....
 
   449450.........460.........470.........480.........490.........500........
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Query Sequence  VKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEGMAFLESHQF
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Template Sequence  IRLYETFEDNTDIYLVMELCTGGELFERVVHKRV. FRESDAARIMKDVLSAVAYCHKLNV
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SS



SGGGGGTTTSS.

TT
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   86...90.........100.........110......... 120.........130.........140....
 
   509510.........520 .........530.........540.........550.........560.....
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Query Sequence  IHRDLAARNCLV. . . DSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKY
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Template Sequence  AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK. . VGTPYYVSPQVLEGL. Y
Template Known Secondary structure 



SGGGSSSSTT




TT


TT

B


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S
GGGS
T
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   145....150.........160.........170.........180..... ....190.........200 .
 
   566...570.........580.........590.........600.........610 .........620...
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Query Sequence  SSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQGHRLYRP. . QLASDTIYQIMYS
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Template Sequence  GPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIRR
Template Known Secondary structure 
TT.SS
S


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   202.......210......... 220.........230.........240.........250.........260
 
   624.....630.........640
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Query Sequence  CWHELPEKRPTFQQLLS
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Template Sequence  LLTKSPKQRITSLQALE
Template Known Secondary structure  S
SSTTTS

TT
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   262.......270........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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