Return to main results Retrieve Phyre Job Id

Job DescriptionP97504
Confidence99.37%DateWed Jul 10 14:16:15 BST 2013
Rank469Aligned Residues101
% Identity27%Templatec2lctA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   262.......270.........280.........290.........300 .........310.........320
Predicted Secondary structure 























.













Query SS confidence 






































.



















Query Sequence  EEEENLHAYDWFAGNISRSQSEQLLRQKGKEGAFMVRNS. SQMGMYTVSLFSKAVNDKKG
Query Conservation           

  
 


  

 

     

 



 
.
  
   

           
Alig confidence 




























.








.










......


Template Conservation 
    
    

 
 


  

 

    . 
 



 
        


 ......   
Template Sequence  GHMQDLSVHLWYAGPMERAGAESILANRS. DGTFLVRQRVKDAAEFAISIK. . . . . . YNV
Template Known Secondary structure 

SS
STTSSSS

S
.TTB

SSS
S......
SS
Template Predicted Secondary structure 
















.







......

Template SS confidence 



























































   661........670.........680......... 690.........700.........710 ...
 
   321........330.........340.........350....... ..360.........370
Predicted Secondary structure 























.....












Query SS confidence 




































. . . . .












Query Sequence  TVKHYHVHTNAENKLYLAENYCFDSIPKLIHYHQHNS. . . . . AGMITRLRHPVST
Query Conservation    

  
               
 

 


       .....             
Alig confidence 






.




























.....












Template Conservation     
  
.        
     
 

  

  
           
   
  
   
Template Sequence  EVKHIKI. MTAEGLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKE
Template Known Secondary structure  S
.TTSSSSSSSTTS
SSS





B
S

Template Predicted Secondary structure 

.




























Template SS confidence 






















































   714.....720 .........730.........740.........750.........760.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D