Job Description P97504 Confidence 100.00% Date Wed Jul 10 14:16:15 BST 2013 Rank 145 Aligned Residues 281 % Identity 15% Template c2kulA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase vrk1; PDBTitle: solution structure of human vaccinia related kinase 1(vrk1) Resolution UNK

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		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.							.	.	420	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		V	S	T	K	A	N	K	V	P	V	S	V	A	L	G	S	G	I	W	E	L	K	R	E	E	I	T	L	L	K	E	L	G	N	G	Q	F	G	V	V	Q	L	G	Q	W	K	G	Q	Y	D	.	.	.	.	.	.	V	A	V	K
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.
Template Conservation
Template Sequence		Q	S	S	A	K	R	H	L	A	E	Q	F	A	V	G	E	I	I	T	D	M	A	K	K	E	W	K	V	G	L	P	I	G	Q	G	G	F	G	C	I	Y	L	A	D	M	N	S	S	E	S	V	G	S	D	A	P	C	V	V	K
Template Known Secondary structure												S	S	S	T	T						T	T	S												S	S	S	S	S									S	S				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		422	.	.	.	.	.	.													.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.					.	.	.	460	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Query Sequence		M	I	K	E	G	A	M	.	.	.	.	.	.	.	.	.	.	.	.	S	E	D	E	F	F	Q	E	A	Q	T	M	M	K	L	S	H	P	K	L	V	K	F	Y	G	V	C	S	.	.	.	.	K	K	Y	P	I	Y	I	V	T
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		V	E	P	S	D	N	G	P	L	F	T	E	L	K	F	Y	Q	R	A	A	K	P	E	Q	I	Q	K	W	I	R	T	R	K	L	K	Y	L	G	V	P	K	Y	W	G	S	G	L	H	D	K	N	G	K	S	Y	R	F	M	I	M
Template Known Secondary structure					T	T		S	S																								T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	I	T	N	G	C	L	L	N	Y	L	K	S	H	G	K	G	L	E	S	C	Q	L	L	E	M	C	Y	D	V	C	E	G	M	A	F	L	E	S	H	Q	F	I	H	R	D	L	A	A	R	N	C	L	V	D	S	D	L	S
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		D	R	F	.	G	S	D	L	Q	K	I	Y	E	A	N	A	K	R	F	S	R	K	T	V	L	Q	L	S	L	R	I	L	D	I	L	E	Y	I	H	E	H	E	Y	V	H	G	D	I	K	A	S	N	L	L	L	N	Y	K	N	P
Template Known Secondary structure					.											T	T	T																							T	T	T	B			S				G	G	G					T	T
Template Predicted Secondary structure					.
Template SS confidence
		132	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		526	.			.	.	530	.	.	.	.	.	.	.	.	.	540	.							.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure				.	.															.	.	.	.	.	.
Query SS confidence				.	.															.	.	.	.	.	.
Query Sequence		V	K	.	.	V	S	D	F	G	M	T	R	Y	V	L	D	D	Q	.	.	.	.	.	.	Y	V	S	S	V	G	T	K	F	P	V	K	W	S	A	P	E	V	F	H	Y	F	K	Y	S	S	K	S	D	V	W	A	F	G	I	L
Query Conservation				.	.															.	.	.	.	.	.
Alig confidence				.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		D	Q	V	Y	L	V	D	Y	G	L	A	Y	R	Y	C	P	E	G	V	H	K	E	Y	K	E	D	P	K	R	C	H	D	G	T	I	E	F	T	S	I	D	A	H	N	G	V	A	P	S	R	R	G	D	L	E	I	L	G	Y	C
Template Known Secondary structure									G	G	G			B	S	S	S	T	T					S				S	S				S	S		T	T	T	S							T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.											.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.
Query Sequence		M	W	E	V	F	S	L	G	K	Q	P	Y	D	L	Y	D	N	.	.	.	.	.	.	.	.	.	.	S	E	V	V	V	K	V	S	Q	G	H	R	L	Y	R	P	Q	L	A	S	D	T	I	Y	Q	I	M	Y	S	C	W	H	E
Query Conservation																			.	.	.	.	.	.	.	.	.	.
Alig confidence								.											.	.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		M	I	Q	W	L	T	.	G	H	L	P	W	E	D	N	L	K	D	P	K	Y	V	R	D	S	K	I	R	Y	R	E	N	I	A	S	L	M	D	K	C	F	P	E	K	N	K	P	G	E	I	A	K	Y	M	E	T	V	K	L	L
Template Known Secondary structure								.	S	S		T	T	T	T	T	T	T															T							T	T	S		S	S																T
Template Predicted Secondary structure								.
Template SS confidence
		251	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		628	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	E	K	R	P	T	F	Q	Q	L	L	S	A	I	E	P	L	R	E	Q	D	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	T	E	K	P	L	Y	E	N	L	R	D	I	L	L	Q	G	L	K	A	I	G
Template Known Secondary structure		T	T	T	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D