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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank204Aligned Residues249
% Identity27%Templatec2jedA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c theta; PDBTitle: the crystal structure of the kinase domain of the protein2 kinase c theta in complex with nvp-xaa228 at 2.32a3 resolution.
Resolution2.32 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   388.390.........400.........410... ......420.... .....430.........440..
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Query Sequence  LKREEITLLKELGNGQFGVVQLGQWK. GQYDVAVKMIK. . . . EGAMSEDEFFQEAQTMMK
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Template Sequence  LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL
Template Known Secondary structure 

GGGTTTTT

TT
TT
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   375....380.........390.........400.........410.........420.........430....
 
   443......450.........460.........470.........480.........490.........500.
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Query Sequence  . LSHPKLVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEGMA
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Template Sequence  AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK. FDLSRATFYAAEIILGLQ
Template Known Secondary structure  GGGSTTB


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BSS.

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   435....440.........450.........460.........470..... ....480.........490...
 
   502.......510.........520.........530.........540.........550.........560.
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Query Sequence  FLESHQFIHRDLAARNCLVDSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFH
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Template Sequence  FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPD. YIAPEILL
Template Known Secondary structure  TT
B




GGG
TTS



TT
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TT

B



S
GG.G

T
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   494.....500.........510.........520.........530.........540.... .....550..
 
   562.......570.........580.........590.........600.........610.........620.
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Query Sequence  YFKYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQGHRLYRPQLASDTIYQIM
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Template Sequence  GQKYNHSVDWWSFGVLLYEMLI. GQSPFHGQDEEELFHSIRM. DNPFYPRWLEKEAKDLL
Template Known Secondary structure  T

B
T.SS
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TTS
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   553......560.........570.... .....580.........590... ......600.........610
 
   622.......630..... ....640
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Query Sequence  YSCWHELPEKRPTF. QQLLS
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Template Sequence  VKLFVREPEKRLGVRGDIRQ
Template Known Secondary structure 

SSGGGSBTTBS
GGG
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   611........620.........630
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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