Return to main results Retrieve Phyre Job Id

Job DescriptionP97504
Confidence99.45%DateWed Jul 10 14:16:15 BST 2013
Rank459Aligned Residues108
% Identity33%Templatec2dlzA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:protein vav-2; PDBTitle: solution structure of the sh2 domain of human protein vav-2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   259260.........270.........280.........290.........300 .........310.......
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Query Sequence  SSSEEEENLHAYDWFAGNISRSQSEQLLRQKGKEGAFMVRNS. SQMGMYTVSLFSKAVND
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Template Sequence  SSGSREIDYTAYPWFAGNMERQQTDNLLKSHA. SGTYLIRERPAEAERFAISIK. . . . . .
Template Known Secondary structure 


S



GGGSTTS

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.TTB

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   5....10.........20.........30...... ...40.........50.......
 
   318.320.........330.........340.........350....... ..360.........370..
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Query Sequence  KKGTVKHYHVHTNAENKLYLAENYCFDSIPKLIHYHQHNS. . . . . AGMITRLRHPVSTKA
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Template Sequence  FNDEVKHIKVVEK. DNWIHITEAKKFDSLLELVEYYQCHSLKESFKQLDTTLKYPYSGPS
Template Known Secondary structure 
SSS.TTSTTS

BSSTTS
TTTT
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   58.60.........70 .........80.........90.........100.........110......
 
   373.
Predicted Secondary structure 

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Query Sequence  NK
Query Conservation    
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Template Sequence  SG
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 

   117.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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