Job Description P97504 Confidence 99.70% Date Wed Jul 10 14:16:15 BST 2013 Rank 372 Aligned Residues 107 % Identity 17% Template c2d9vA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:pleckstrin homology domain-containing protein PDBTitle: solution structure of the ph domain of pleckstrin homology2 domain-containing protein family b member 1 from mouse Resolution UNK

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		M	E	S	K	S	I	L	E	E	L	L	L	K	K	S	Q	Q	K	K	K	M	S	P	N	N	Y	K	E	R	L	F	V	L	T	.	K	T	S	L	S	Y	Y	E	Y	D	K	M	K	R	G	S	R	K	G	S	I	E	I	K	K
Query Conservation																																				.
Alig confidence																	.	.	.	.	.															.															.	.
Template Conservation																	.	.	.	.	.																														.	.
Template Sequence		G	S	S	G	L	V	R	G	G	W	L	W	R	Q	S	.	.	.	.	.	S	I	L	R	R	W	K	R	N	W	F	A	L	W	L	D	G	T	L	G	Y	Y	H	D	E	T	A	Q	D	.	.	E	E	D	R	V	V	I	H	F
Template Known Secondary structure		S															.	.	.	.	.	S	S	S												T	T	T						S	S	S	S	T	T	S	.	.								T	T
Template Predicted Secondary structure																	.	.	.	.	.																														.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.						.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.
		60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure											.	.	.	.	.																			.
Query SS confidence											.	.	.	.	.																			.
Query Sequence		I	R	C	V	E	K	V	N	L	.	.	.	.	.	E	E	Q	T	P	V	E	R	Q	Y	P	F	Q	I	V	Y	K	D	.	G	L	L	Y	V	Y	A	S	N	E	E	S	R	C	Q	W	L	K	A	L	Q	K	E	I	R	G	N
Query Conservation											.	.	.	.	.																			.
Alig confidence											.	.	.	.	.																			.
Template Conservation
Template Sequence		N	V	R	D	I	K	V	G	Q	E	C	Q	D	V	Q	P	P	E	G	R	S	R	D	G	L	L	T	V	N	L	R	E	G	S	R	L	H	L	C	A	E	T	R	D	D	A	I	A	W	K	T	A	L	M	E	A	N	S	T	P
Template Known Secondary structure		T							G	G	G		S	S					S	S			T	T	T							T	T	S								S	S																T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		114
Predicted Secondary structure
Query SS confidence
Query Sequence		P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		117

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D