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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank110Aligned Residues246
% Identity25%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410... ......420.........430.. .......440......
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Query Sequence  EEITLLKELGNGQFGVVQLGQWK. GQYDVAVKMIKEGAMSEDE. . . FFQEAQTMMKLSHP
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Template Sequence  DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP
Template Known Secondary structure  TTTTTTT


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T
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   11........20.........30.........40.........50.........60.........70
 
   447..450.........460.........470.........480.........490.........500......
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Query Sequence  KLVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEGMAFLESH
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Template Sequence  NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF. YSEADASHCIQQILESIAYCHSN
Template Known Secondary structure  TB


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S
BTT
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   71........80.........90.........100...... ...110.........120.........
 
   507..510.........520. ........530.........540.........550.........560...
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Query Sequence  QFIHRDLAARNCLVD. . . SDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYF
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Template Sequence  GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF. . AGTPGYLSPEVLKKD
Template Known Secondary structure  T
B



SGGGS
SSTT




TT
B

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B


S..
S
GGG

T
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   130.........140.........150.........160.........170.. .......180.......
 
   564.....570.........580.........590.........600.........610 .........620
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Query Sequence  KYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQGHRLYRP. . . QLASDTIYQI
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Template Sequence  PYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL
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B
T.SS
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TTGGGGS
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   189190.........200........ .210.........220.........230.........240.......
 
   621........630.........640
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Query Sequence  MYSCWHELPEKRPTFQQLLS
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Template Sequence  IDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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   248.250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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