Return to main results Retrieve Phyre Job Id

Job DescriptionP97504
Confidence99.54%DateWed Jul 10 14:16:15 BST 2013
Rank435Aligned Residues137
% Identity22%Templatec2b3oA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: crystal structure of human tyrosine phosphatase shp-1
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   249250.........260.........270.........280.........290.........300 .......
Predicted Secondary structure 




































.





Query SS confidence 



















































.






Query Sequence  SKMSWGFPESSSSEEEENLHAYDWFAGNISRSQSEQLLRQKGKEGAFMVRNS. SQMGMYT
Query Conservation           
            

  
 


  

 

     

 



 
.
  
   
Alig confidence 



















































.






Template Conservation           
  
          



 
 
 


 

     

 



 
 
  
 
 
Template Sequence  QDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFV
Template Known Secondary structure 

SSS

B







GGG
TTB
TT



TT
SSSTT
Template Predicted Secondary structure 








































Template SS confidence 



























































   87..90.........100.........110.........120.........130.........140......
 
   308.310.........320.........330.........340.........350...... ...360...
Predicted Secondary structure 






























....






Query SS confidence 
















































. . . .






Query Sequence  VSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPKLIHYHQHN. . . . SAGMITR
Query Conservation 

             

  
               
 

 


      ....       
Alig confidence 







.










.



























....






Template Conservation 

      .     
 
  
.        
     
 

  

  
   

    
    
Template Sequence  LSVLSDQP. KSPLRVTHIKV. MCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVY
Template Known Secondary structure  .


.B

TTSBBSSSS

BSS

SSS

Template Predicted Secondary structure 


.



.



















Template SS confidence 



























































   147..150.... .....160..... ....170.........180.........190.........200....
 
   364.....370.........380.......
Predicted Secondary structure 





















Query SS confidence 























Query Sequence  LRHPVSTKANKVPVSVALGSGIWE
Query Conservation                          
Alig confidence 























Template Conservation 
  
             

  

 
Template Sequence  LRQPYYATRVNAADIENRFWEEFE
Template Known Secondary structure 









GGGT


Template Predicted Secondary structure 












Template SS confidence 























   209210.........220.........230..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D