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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank254Aligned Residues241
% Identity18%Templatec2ac5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391....... .400.........410... ......420... ......430.........440... ...
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Query Sequence  EEITLLKE. LGNGQFGVVQLGQWK. GQYDVAVKMI. KEGAMSEDEFFQEAQTMMKL. SHP
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Template Sequence  DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHR
Template Known Secondary structure  GS
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   81........90.........100.........110.........120.........130.........140
 
   447..450.........460.........470.........480.........490.........500......
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Query Sequence  KLVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCEGMAFLESH
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Template Sequence  NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH. FNELEASVVVQDVASALDFLHNK
Template Known Secondary structure  TB


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   141........150.........160.........170...... ...180.........190.........
 
   507..510.........520.........530.........540.........550.........560......
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Query Sequence  QFIHRDLAARNCLVDSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS
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Template Sequence  GIAHRDLKPENILCEHPNQVSPVKICDFGPCGSAEYMAPE. . . . . . . VVEAFSEEASIYD
Template Known Secondary structure  T


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GGG
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SSGGG

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   200.........210.........220.........230......... 240.........250..
 
   567..570.........580.........590... ......600.........610 ..
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Query Sequence  SKSDVWAFGILMWEVFSLGKQPYDLYD. . . . . . . . . . . NSEVVVKVSQGHRLYRP. . . QL
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Template Sequence  KRCDLWSLGVILYILLS. GYPPFVGRCGSDCGWACPACQNMLFESIQEGKYEFPDKDWAH
Template Known Secondary structure  T.SS
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   274.....280.........290 .........300.........310.........320.........330..
 
   613......620.........630.........640
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Query Sequence  ASDTIYQIMYSCWHELPEKRPTFQQLLS
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Template Sequence  ISCAAKDLISKLLVRDAKQRLSAAQVLQ
Template Known Secondary structure  S
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   337..340.........350.........360....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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