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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank22Aligned Residues248
% Identity19%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   387..390.........400.........410... ......420.........430. .......
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Query Sequence  ELKREEITLLKELGNGQFGVVQLGQWK. GQYDVAVKMIKEGAMSED. . . . . . . EFFQEAQ
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Template Sequence  HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS
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GGG
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   185....190.........200.........210.........220.........230.........240....
 
   439440.........450.........460.........470.........480.........490........
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Query Sequence  TMMKLSHPKLVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGLESCQLLEMCYDVCE
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Template Sequence  LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV. FSEADMRFYAAEIIL
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   245....250.........260.........270.........280........ .290.........300...
 
   499500.........510.........520.........530.........540.........550........
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Query Sequence  GMAFLESHQFIHRDLAARNCLVDSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPE
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Template Sequence  GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG. . . YMAPE
Template Known Secondary structure  TT




GGG
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   304.....310.........320.........330.........340.........350..... ....360
 
   559560 .........570.........580.........590. ........600.........610....
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Query Sequence  VF. HYFKYSSKSDVWAFGILMWEVFSLGKQPYDL. . . YDNSEVVVKVSQGHRLYRPQLAS
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Template Sequence  VLQKGVAYDSSADWFSLGCMLFKLLR. GHSPFRQHKTKDKHEIDRMTLT. MAVELPDSFS
Template Known Secondary structure  SSS



T.SS
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   361........370.........380...... ...390.........400........ .410........
 
   615....620.........630... ......640
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Query Sequence  DTIYQIMYSCWHELPEKRP. . . . . TFQQLLS
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Template Sequence  PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE
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   419420.........430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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