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Job DescriptionP97504
Confidence100.00%DateWed Jul 10 14:16:15 BST 2013
Rank3Aligned Residues435
% Identity39%Templatec1y57A_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase src; PDBTitle: structure of unphosphorylated c-src in complex with an inhibitor
Resolution1.91 Å
Model Dimensions (Å)X:99.519 Y:56.946 Z:48.149

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   190.........200.........210....... ..220...... ...230.........240.......
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Query Sequence  ILPQYDSYSKKSCGSQPTSNIRYIPRED. CPDWWQVRK. LKSEEDIACSNQLERNIASHS
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Template Sequence  FVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPS. . . . .
Template Known Secondary structure  SS
B


SSSB

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   86...90.........100.........110.........120.........130.........140
 
   248.250.........260.........270.........280.........290 .........300 .....
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Query Sequence  TSKMSWGFPESSSSEEEENLHAYDWFAGNISRSQSEQLLRQKG. KEGAFMVRNS. SQMGM
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Template Sequence  . . . . . . . . . . . . . . . . . DSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGA
Template Known Secondary structure  .................TSGGGSTTS

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   141........150.........160.........170.........180...
 
   306...310.........320.........330.........340.........350.........360.....
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Query Sequence  YTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPKLIHYHQHNSAGMITRLR
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Template Sequence  YCLSVS. DFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLT
Template Known Secondary structure  .TTT
SSS
SSTTSSS

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   184..... 190.........200.........210.........220.........230.........240..
 
   366...370.........380.........390.........400.........410.........420.....
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Query Sequence  HPVSTKANKVPVSVALGSGIWELKREEITLLKELGNGQFGVVQLGQWKGQYDVAVKMIKE
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Template Sequence  TVCPTS. . . KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP
Template Known Secondary structure 
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SS



TTB

GGGTTTTT
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   243..... .250.........260.........270.........280.........290.........
 
   426...430.........440.........450.........460.........470.........480... .
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Query Sequence  GAMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKG. L
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Template Sequence  GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS. EEPIYIVTEYMSKGSLLDFLKGETGKYL
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TTB


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   300.........310.........320.........330 .........340.........350........
 
   485....490.........500.........510.........520.........530.........540....
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Query Sequence  ESCQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDSDLSVKVSDFGMTRYVLDDQYVS
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Template Sequence  RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA
Template Known Secondary structure 
TT
S

SGGG
GGG



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   359360.........370.........380.........390.........400.........410........
 
   545....550.........560.........570.........580.........590.........600....
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Query Sequence  SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQG
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Template Sequence  RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG
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TTTT
SGGGS




TTS

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   419420.........430.........440.........450.........460.........470........
 
   605....610.........620.........630.........640.........650.
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Query Sequence  HRLYRPQLASDTIYQIMYSCWHELPEKRPTFQQLLSAIEPLREQDKP
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Template Sequence  YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP
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TT

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   479480.........490.........500.........510.........520.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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