Return to main results Retrieve Phyre Job Id

Job DescriptionP97504
Confidence99.54%DateWed Jul 10 14:16:15 BST 2013
Rank439Aligned Residues126
% Identity23%Templatec1a81E_
PDB info PDB header:complex (transferase/peptide)Chain: E: PDB Molecule:syk kinase; PDBTitle: crystal structure of the tandem sh2 domain of the syk kinase bound to2 a dually tyrosine-phosphorylated itam
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   239240.........250.........260.........270.........280.........290 .......
Predicted Secondary structure 









































.



Query SS confidence 



















































.






Query Sequence  LERNIASHSTSKMSWGFPESSSSEEEENLHAYDWFAGNISRSQSEQLLRQKG. KEGAFMV
Query Conservation                     
            

  
 


  

 

    . 

 


Alig confidence 



















































.






Template Conservation    
                              
  
 
 
  

  
       
 


Template Sequence  CLLKKPFNRPQGVQPKTPQLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLI
Template Known Secondary structure  S


SB



TT






TSGGG
TT

SS


TT
Template Predicted Secondary structure 










































Template SS confidence 



























































   101........110.........120.........130.........140.........150.........160
 
   298.300.........310.........320.........330.........340.........350.......
Predicted Secondary structure 






































Query SS confidence 



























































Query Sequence  RNSSQMGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPKLIHYHQHNS
Query Conservation 
 

  
   

             

  
               
 

 


       
Alig confidence 













......







































Template Conservation 
 
       

  ......    
 
  
     
         
 

  

  
    
Template Sequence  RARDNNGSYALCLL. . . . . . HEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKA
Template Known Secondary structure 
SSSS......TT
TTS

TTS

BS
TT

Template Predicted Secondary structure 





......














Template SS confidence 



























































   195....200........ .210.........220.........230.........240........
 
   358.360.........370
Predicted Secondary structure 












Query SS confidence 












Query Sequence  AGMITRLRHPVST
Query Conservation               
Alig confidence 












Template Conservation    
   
  
   
Template Sequence  DGLLRVLTVPCQK
Template Known Secondary structure  TTSSS


SB


Template Predicted Secondary structure 







Template SS confidence 












   249250.........260.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D