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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank117Aligned Residues245
% Identity42%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.........260.........270 .........280... ......290...
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Query Sequence  IPRESIKLVKKLGAGQFGEVWMGYYNNST. . . . KVAVKTLKPGTMS. . . . VQAFLEEANL
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Template Sequence  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA
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GGG



B

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   121........130.........140.........150.........160.........170.........180
 
   294.....300.........310.........320.........330.........340.........350...
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Query Sequence  MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE
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Template Sequence  MHSLDHRNLIRLYGV. VLTPPMKMVTELAPLGSLLDRLR. KHQGHFLLGTLSRYAVQVAE
Template Known Secondary structure  T


TTB

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   181........190..... ....200.........210........ .220.........230........
 
   354.....360.........370.........380.........390.........400.........410...
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Query Sequence  GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE
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Template Sequence  GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM. . . . . . . . . . . RALPVPFAWCAPE
Template Known Secondary structure  TT


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SGGGSSSS


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   239240.........250.........260.........270.... .....280.......
 
   414.....420.........430.........440.........450....... ..460.........470..
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Query Sequence  AINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALS. QGYRMPRMENCPDEL
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Template Sequence  SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI
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   301........310.........320.........330.........340.........350.........360
 
   473......480.........490.........
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Query Sequence  YDIMKMCWKEKAEERPTFDYLQSVLDD
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Template Sequence  YNVMVQCWAHKPEDRPTFVALRDFLLE
Template Known Secondary structure  T
SSGGGS

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   361........370.........380.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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