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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank198Aligned Residues235
% Identity24%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.........260.........270. ........280.........290.........300
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Query Sequence  IPRESIKLVKKLGAGQFGEVWMGYYNNSTK. VAVKTLKPGTMSVQAFLEEANLMKTLQHD
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Template Sequence  HDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHP
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TTT


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T
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   16...20.........30.........40.........50.........60.........70.....
 
   301........310.........320.........330.........340.........350.........360
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Query Sequence  KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER
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Template Sequence  NIVRFKEVILTPTHLAIVMEYASGGELFERICNA. . GRFSEDEARFFFQQLISGVSYAHA
Template Known Secondary structure  TB


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   76...80.........90.........100......... 110.........120.........130...
 
   361........370........ .380.........390.........400.........410........
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Query Sequence  KNYIHRDLRAANVLVSES. . LMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG
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Template Sequence  MQVAHRDLKLENTLLDGSPAPRLKIADFGY. . . . . . . . . . . . . . . . TPAYIAPEVLLKKE
Template Known Secondary structure  S
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GGG


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   134.....140.........150.........160... ......170.......
 
   419420.........430.........440.........450......... 460.........470...
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Query Sequence  CFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQG. . . . . YRMPRMENCPDELY
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Template Sequence  YDGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR
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   193......200.........210.. .......220.........230.........240.........250.
 
   474.....480.........490.....
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Query Sequence  DIMKMCWKEKAEERPTFDYLQS
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Template Sequence  HLISRIFVADPAKRISIPEIRN
Template Known Secondary structure  S
SSGGGS

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   252.......260.........270...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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