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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank252Aligned Residues237
% Identity24%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   245....250.........260........ .270........ .280.........290....... .
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Query Sequence  ESIKLVKKLGAGQFGEVWMGYYNN. STKVAVKTLK. . . . PGTMSVQAFLEEANLMKTL. Q
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN
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   353......360.........370.........380.........390.........400.........410..
 
   299300.........310.........320.........330.........340.........350........
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Query Sequence  HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI
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Template Sequence  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS. . RRFDEARARFYAAEIISALMFL
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   413......420.........430.........440........ .450.........460.........470
 
   359360.........370.........380.........390.........400.........410........
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Query Sequence  ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG
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Template Sequence  HDKGIIYRDLKLDNVLLDHEGHCKLADFGMC. . . . . . . . . . KEGICGTPDYIAPEILQEM
Template Known Secondary structure  TT
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GGG
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   471........480.........490.........500. ........510.........520
 
   419420.........430.........440.........450.........460.........470........
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Query Sequence  CFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIMKM
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Template Sequence  LYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILNDE. VVYPTWLHEDATGILKS
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   530.........540......... 550.........560.........570 .........580.......
 
   479480......... 490.....
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Query Sequence  CWKEKAEERPT. . . . . . FDYLQS
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Template Sequence  FMTKNPTMRLGSLTQGGEHAILR
Template Known Secondary structure  T
SSGGGSTTSGGGT
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   588.590.........600.........610
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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