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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank46Aligned Residues235
% Identity26%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   253......260........ .270.........280.........290.........300.........310.
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Query Sequence  LGAGQFGEVWMGYYNN. STKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK
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Template Sequence  RKLGSYGEVLLCKEKNGHSEKAIKVIK. . KKFHEEIYNEISLLKSLDHPNIIKLFDVFED
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TTT

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   61........70.........80....... ..90.........100.........110........
 
   312.......320.........330.........340.........350.........360.........370.
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Query Sequence  EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA
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Template Sequence  KKYFYLVTEFYEGGELFEQIINR. . HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPE
Template Known Secondary structure  SS

TT
B..S


TT
S

SGG
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   137..140.........150......... 160.........170.........180.........190....
 
   372... ....380.........390.........400.........410.........420........
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Query Sequence  NVLV. . . SESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWS
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Template Sequence  NILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR. . LGTAYYIAPEVLKK. KYNEKCDVWS
Template Known Secondary structure  GSSTT

SS


TT


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B


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S
TTT

TT.
B
T
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   195....200.........210.........220....... ..230.........240. ........250.
 
   429430.........440.........450.........460...... ...470.........480.....
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Query Sequence  FGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRME. . . NCPDELYDIMKMCWKEKAE
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Template Sequence  CGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYN
Template Known Secondary structure  .SS
SS

SS





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T
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   252.......260. ........270.........280.........290.........300.........310
 
   486...490.....
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Query Sequence  ERPTFDYLQS
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Template Sequence  KRCTAEEALN
Template Known Secondary structure  TS

T
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   311........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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