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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank23Aligned Residues259
% Identity23%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   231........240.........250.........260.........270. ........280. ....
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Query Sequence  PQKPWDKDAWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTK. VAVKTLKPGT. . . . MSVQ
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Template Sequence  QEEGEYFNVPVPPLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVE
Template Known Secondary structure  TTGGGT





TTSSBTTTB
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TTTT
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   280.........290.........300.........310.........320.........330.........
 
   286...290....... ..300.........310.........320.........330.........340....
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Query Sequence  AFLEEANLMKTL. QHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL
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Template Sequence  CTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV. . GRFKEPHA
Template Known Secondary structure  T
TT

TTB



B
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S
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   386...390.........400.........410.........420.........430..... ....440...
 
   345....350.........360.........370.........380.........390.........400....
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Query Sequence  IDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAK
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Template Sequence  VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKF. . C
Template Known Secondary structure  TS




STT
SSS



TT



TT

B

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   444.....450.........460.........470.........480.........490.........500 .
 
   405....410.........420.........430.........440.........450.........460....
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Query Sequence  FPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPR
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Template Sequence  GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEH. NVAY
Template Known Secondary structure  S
SSS

T


BST.SS
SS

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   503......510.........520.........530...... ...540.........550...... ...560
 
   465....470.........480......... 490.....
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Query Sequence  MENCPDELYDIMKMCWKEKAEERPT. . . . . FDYLQS
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Template Sequence  PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE
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TTS
S
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   561........570.........580.........590......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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