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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank103Aligned Residues239
% Identity23%Templatec3p23B_
PDB info PDB header:hydrolase, transferaseChain: B: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the human kinase and rnase domains in complex2 with adp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.........260 .........270.........280.........290....... ..
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Query Sequence  IPRESIKLVKKLGAGQFGE. VWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL. QH
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Template Sequence  VGKISFCPKDVLGHGAEGTIVYRGMF. DNRDVAVKRILPECFS. . FADREVQLLRESDEH
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SS
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   566...570.........580.........590. ........600....... ..610.........620..
 
   300.........310.........320.........330.........340.........350.........
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Query Sequence  DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE
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Template Sequence  PNVIRYFCTEKDRQFQYIAIELCA. ATLQEYVE. QKDFAHLGLEPITLLQQTTSGLAHLH
Template Known Secondary structure  TTB


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   623......630.........640...... ...650.... .....660.........670.........680
 
   360.........370.........380 .........390.........400.........410....
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Query Sequence  RKNYIHRDLRAANVLVSESLM. . . . . CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA
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Template Sequence  SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAP. . . . . . . . . . GTEGWIAPEM
Template Known Secondary structure  TT





SGGG


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   681........690.........700.........710.........720 .........730
 
   415....420.........430.........440.........450....... ..460.........470..
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Query Sequence  INFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALS. . QGYRMPRMENCPDEL
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Template Sequence  LSEENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIA
Template Known Secondary structure  GT




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   743......750.........760.........770.........780.........790.........800..
 
   473......480.........490.....
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Query Sequence  YDIMKMCWKEKAEERPTFDYLQS
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Template Sequence  RELIEKMIAMDPQKRPSAKHVLK
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SSGGG


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   806...810.........820........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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