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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank183Aligned Residues241
% Identity23%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   245....250.........260....... ..270......... 280.........290.........300.
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Query Sequence  ESIKLVKKLGAGQFGEVWMGYYN. NSTKVAVKTLKP. . GTMSVQAFLEEANLMKTLQHDK
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPN
Template Known Secondary structure 
SS
TTT

B


T


TT
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   74.....80.........90.........100.........110.........120.........130...
 
   302.......310.........320.........330.........340.........350.........360.
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Query Sequence  LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK
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Template Sequence  IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR. . KRFSEHDAARIIKQVFSGITYMHKH
Template Known Secondary structure  B


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   135....140.........150.........160....... ..170.........180.........190..
 
   362.......370.........380.........390.........400.........410.........420.
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Query Sequence  NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT
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Template Sequence  NIVHRDLKPENILLESKEKDCDIKIIDF. . . . . . . GLSTCFQQNTTAYYIAPEVLRGTYD
Template Known Secondary structure  T


S


GGGSSSSTT


S
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TTTB




GGG

GGGGGT


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   193......200.........210.........220 .........230.........240.....
 
   422.......430.........440.........450.........460 .........470........
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Query Sequence  IKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGY. . . RMPRMENCPDELYDIMKM
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Template Sequence  EKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK
Template Known Secondary structure  .SS
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SST




SGGGGGS
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   253......260......... 270.........280.........290.........300.........310.
 
   479480.........490.....
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Query Sequence  CWKEKAEERPTFDYLQS
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Template Sequence  MLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
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   312.......320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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