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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank214Aligned Residues238
% Identity26%Templatec3fmeA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 6; PDBTitle: crystal structure of human mitogen-activated protein kinase kinase 62 (mek6) activated mutant (s207d, t211d)
Resolution2.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270. ........280.........290........
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Query Sequence  WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTK. VAVKTLKPGTMSVQAFLEEANLMKTLQ
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Template Sequence  MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRNSQEQKRLLMDLDISMRTVD
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GGG
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   46...50.........60.........70.........80.........90.........100.....
 
   299300.........310.........320.........330.. .......340.........350.......
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Query Sequence  HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLK. SDEGGKVLLPKLIDFSAQIAEGMAY
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Template Sequence  CPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH
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TTB


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   109110.........120.........130.........140.........150.........160........
 
   358.360. ........370.........380.........390.........400.........410......
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Query Sequence  IERK. NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN
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Template Sequence  LHSKLSVIHRDVKPSNVLINALGQVKMCDFA. . . . . . . . . . . . . . . . . GCKPYMAPERIN
Template Known Secondary structure  S






SGGG

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S
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   169170.........180.........190......... 200.........210.
 
   417 ..420.........430.........440........ .450.........460.........470..
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Query Sequence  F. . GCFTIKSDVWSFGILLYEIVTYGKIPYPGRT. . NADVMSALSQGYRMPRMENCPDEL
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Template Sequence  PELNQYSVKSDIWSLGITMIELAI. LRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEF
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TT


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   227..230.........240.........250 .........260.........270.........280.....
 
   473......480.........490.....
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Query Sequence  YDIMKMCWKEKAEERPTFDYLQS
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Template Sequence  VDFTSQCLKKNSKERPTYPELMQ
Template Known Secondary structure  T
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   288.290.........300.........310
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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