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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank181Aligned Residues245
% Identity23%Templatec3dxnA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-like domain protein kinase isoform 3; PDBTitle: crystal structure of the calcium-dependent kinase from toxoplasma2 gondii, 541.m00134, kinase domain.
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   249250.........260.........270......... 280.........290.........300....
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Query Sequence  LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKP. . . . GTMSVQAFLEEANLMKTLQHDKLVR
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Template Sequence  YQRVKKLGSYGEVLLCKDKTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK
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   23......30.........40.........50.........60.........70.........80..
 
   305....310.........320.........330.........340.........350.........360....
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Query Sequence  LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI
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Template Sequence  LYEFFEDKRNYYLVMEVYRGGELFDEIILR. . QKFSEVDAAVIMKQVLSGTTYLHKHNIV
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   86...90.........100.........110..... ....120.........130.........140...
 
   365....370.........380.........390.........400.........410.........420....
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Query Sequence  HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS
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Template Sequence  HRDLKPENLLLESKSDALIKIVDFG. . . . . . . LSAHFERLGTAYYIAPEVLR. KKYDEKC
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   144.....150.........160........ .170.........180........ .190.....
 
   425....430.........440.........450.........460 .........470.........480.
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Query Sequence  DVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGY. . . RMPRMENCPDELYDIMKMCWK
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Template Sequence  DVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLT
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   204.....210....... ..220.........230.........240.........250.........260..
 
   482.......490.... .....500....
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Query Sequence  EKAEERPTFDYLQ. . SVLDDFYTAT
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Template Sequence  YEPSKRISAEEALNHPWIVKFCSQK
Template Known Secondary structure  S
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   263......270.........280.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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