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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank126Aligned Residues239
% Identity30%Templatec3dtcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 9; PDBTitle: crystal structure of mixed-lineage kinase mlk1 complexed2 with compound 16
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270.........280.........290.........
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Query Sequence  WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQH
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Template Sequence  LEIDFAELTLEEIIGIGGFGKVYRAFWIGD. EVAVKAAT. . . . . IENVRQEAKLFAMLKH
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   137..140.........150.........160...... ...170.... .....180.........190
 
   300.........310.........320.........330.........340.........350.........
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Query Sequence  DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE
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Template Sequence  PNIIALRGVCLKEL. . CLVMEFARGGPLNRVLSGK. . . RIPPDILVNWAVQIARGMNYLH
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   201........210.... .....220.........230... ......240.........250.....
 
   360.... .....370.........380.........390.........400.........410......
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Query Sequence  RKNYI. . . HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN
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Template Sequence  DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF. . . . . . . . GLGAYAWMAPEVIR
Template Known Secondary structure  SSSS



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   258.260.........270.........280.........290..... ....300.........
 
   417..420.........430.........440.........450.........460 .........470.....
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Query Sequence  FGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGY. RMPRMENCPDELYDI
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Template Sequence  ASMFSKGSDVWSYGVLLWELLT. GEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKL
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   323......330.........340.... .....350.........360.........370.........380.
 
   476...480.........490........
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Query Sequence  MKMCWKEKAEERPTFDYLQSVLD
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Template Sequence  MEDCWNPDPHSRPSFTNILDQLT
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   382.......390.........400....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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