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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank191Aligned Residues239
% Identity25%Templatec3dbqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of ttk kinase domain
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   241........250.........260.........270.........280...... ...290.......
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Query Sequence  EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA. . . FLEEANLMKTL
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Template Sequence  SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL
Template Known Secondary structure  SSS
S

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TT

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   519520.........530.........540.........550.........560.........570........
 
   298 .300.........310.........320.........330.........340.........350.....
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Query Sequence  Q. . HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM
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Template Sequence  QQHSDKIIRLYDYEITDQYIYMVMECG. NIDLNSWLKKK. . KSIDPWERKSYWKNMLEAV
Template Known Secondary structure  TTT
TTB


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   579580.........590.........600..... ....610...... ...620.........630.....
 
   356...360.........370.........380.........390.........400.........410.....
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Query Sequence  AYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI
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Template Sequence  HTIHQHGIVHSDLKPANFLIV. DGMLKLIDFGIANQM. . . . . . . . . . . VGTVNYMPPEAI
Template Known Secondary structure  TT






GGG.TT


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   636...640.........650...... ...660.........670. ........680...
 
   416...420.........430.........440........ .450.........460.........470...
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Query Sequence  NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRT. . NADVMSALSQGYRMPRMENCPDELY
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Template Sequence  KDMSISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ
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   696...700.........710........ .720.........730.........740.........750....
 
   474.....480.........490.....
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Query Sequence  DIMKMCWKEKAEERPTFDYLQS
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Template Sequence  DVLKCCLKRDPKQRISIPELLA
Template Known Secondary structure  T
SSTTTS

T
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   766...770.........780.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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