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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank236Aligned Residues220
% Identity23%Templatec3db8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:polo-like kinase 1; PDBTitle: crystal structure of an activated (thr->asp) polo-like2 kinase 1 (plk1) catalytic domain in complex with compound3 041
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   245....250.........260........ .270........ .280.........290.........
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Query Sequence  ESIKLVKKLGAGQFGEVWMGYYNN. STKVAVKTLK. . . . PGTMSVQAFLEEANLMKTLQH
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Template Sequence  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN
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TTTTT

TTTT
STT


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   37..40.........50.........60.........70.........80.........90......
 
   300.........310.........320.........330.........340.........350.........
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Query Sequence  DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE
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Template Sequence  PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR. . KAVTEPEARYFMRQTIQGVQYLH
Template Known Secondary structure  TTB


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TT
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   97..100.........110.........120.........130. ........140.........150....
 
   360.........370.........380.........390.........400.........410.........
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Query Sequence  RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC
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Template Sequence  NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI. . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT




GGG
TT




TT

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   155....160.........170.........180.......
 
   420.........430.........440.........450.........460.........470.........
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Query Sequence  FTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIMKMC
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Template Sequence  HSFEVDIWSLGCILYTLLV. GKPPFETSCLKETYIRIKKNE. YSVPRHINPVASALIRRM
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   214.....220.........230.. .......240.........250... ......260.........270.
 
   480.........490.....
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Query Sequence  WKEKAEERPTFDYLQS
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Template Sequence  LHADPTLRPSVAELLT
Template Known Secondary structure  T
SSGGGS

T
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   272.......280.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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