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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank43Aligned Residues252
% Identity22%Templatec3c4wB_
PDB info PDB header:transferaseChain: B: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of g protein coupled receptor kinase 1 bound to atp2 and magnesium chloride at 2.7a
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   241........250.........260.........270. ........280. ........290.....
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Query Sequence  EIPRESIKLVKKLGAGQFGEVWMGYYNNSTK. VAVKTLKPGT. . . . MSVQAFLEEANLMK
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Template Sequence  PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA
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GGG
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   181........190.........200.........210.........220.........230.........240
 
   296...300.........310.........320.........330... ......340.........350...
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Query Sequence  TLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKS. . DEGGKVLLPKLIDFSAQIAE
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Template Sequence  KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS
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   241........250.........260.........270.........280.........290.........300
 
   354.....360.........370.........380.........390.........400.........410...
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Query Sequence  GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE
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Template Sequence  GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG. FMAPE
Template Known Secondary structure  TT




GGG
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   301........310.........320.........330.........340.........350.... .....
 
   414.....420.........430.........440....... ..450.........460.........
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Query Sequence  AINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGR. . . . TNADVMSALSQGYRMPRMENCP
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Template Sequence  LLLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGEKVENKELKQRVLEQA. VTYPDKFS
Template Known Secondary structure  TT

B
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   360.........370.........380.... .....390.........400......... 410.......
 
   470.........480....... ..490.....
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Query Sequence  DELYDIMKMCWKEKAEER. . . . . PTFDYLQS
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Template Sequence  PASKDFCEALLQKDPEKRLGFRDGSCDGLRT
Template Known Secondary structure  S
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BTTBSTTGGG
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   418.420.........430.........440........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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