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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank128Aligned Residues243
% Identity23%Templatec2zv2A_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase kinase 2; PDBTitle: crystal structure of human calcium/calmodulin-dependent protein kinase2 kinase 2, beta, camkk2 kinase domain in complex with sto-609
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.........260.........270. ........280.........290.........300
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Query Sequence  IPRESIKLVKKLGAGQFGEVWMGYYNNSTK. VAVKTLKPGTMSVQAFLEEANLMKTLQHD
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Template Sequence  VQLNQYTLKDEI. . GKYGVVKLAYNENDNTYYAMKVLSKK. . . . EQVYQEIAILKKLDHP
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   161........170.. .......180.........190........ .200.........210....
 
   301........310.. .......320.........330.........340.........350........
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Query Sequence  KLVRLYAVVTKE. . EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI
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Template Sequence  NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK. . . PLSEDQARFYFQDLIKGIEYL
Template Known Secondary structure  TB


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   248.250.........260.........270.........280... ......290.........300....
 
   359360.........370.........380.........390.........400.........410........
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Query Sequence  ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG
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Template Sequence  HYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPA. FMAPESLSET
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   305....310.........320.........330.........340.........350... ......360...
 
   419 420.........430.........440.........450......... 460.........470....
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Query Sequence  C. . . FTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQG. YRMPRMENCPDELYD
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Template Sequence  RKIFSGKALDVWAMGVTLYCFVF. GQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKD
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   364.....370.........380...... ...390.........400.........410.........420..
 
   475....480.........490.....
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Query Sequence  IMKMCWKEKAEERPTFDYLQS
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Template Sequence  LITRMLDKNPESRIVVPEIKL
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   423......430.........440...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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