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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank231Aligned Residues260
% Identity23%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   245....250.........260.........270......... 280.........290.........300...
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Query Sequence  ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKP. GTMSVQAFLEEANLMKTLQHDKLV
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Template Sequence  NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLV
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   3940.........50.........60.........70.........80.........90........
 
   304.....310.........320.........330..... ....340.........350.........360.
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Query Sequence  RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDE. . GGKVLLPKLIDFSAQIAEGMAYIERK
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Template Sequence  SLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR
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   99100.........110.........120.........130.........140.........150........
 
   362.......370.........380.........390.........400.........410.........420.
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Query Sequence  NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT
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Template Sequence  AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLVVKGTLG. YIDPEYFIKGRLT
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   159160.........170.........180.........190.........200.... .....210.......
 
   422.......430.........440.........450........ .460.....
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Query Sequence  IKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQ. . . . . . . . . . . . . . . . GYRMPRM
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Template Sequence  EKSDVYSFGVVLFEVLC. ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR
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   220.........230...... ...240.........250.........260.........270........
 
   466...470.........480.........490.........500......
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Query Sequence  ENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEG
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Template Sequence  PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES
Template Known Secondary structure  T
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   279280.........290.........300.........310.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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