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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank124Aligned Residues233
% Identity19%Templatec2pziA_
PDB info PDB header:transferaseChain: A: PDB Molecule:probable serine/threonine-protein kinase pkng; PDBTitle: crystal structure of protein kinase pkng from mycobacterium2 tuberculosis in complex with tetrahydrobenzothiophene ax20017
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   247..250.........260....... ..270.........280.... .....290.........300..
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Query Sequence  IKLVKKLGAGQFGEVWMGYYN. . NSTKVAVKTLKPGTMSV. . QAFLEEANLMKTLQHDKL
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Template Sequence  YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSI
Template Known Secondary structure  TTGGGTTS
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GGGGG


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   151........160.........170.........180.........190.........200.........210
 
   303......310. ........320.........330.........340.........350.......
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Query Sequence  VRLYAVVTK. . . . . EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY
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Template Sequence  VQIFNFVEHTDRHGDPVGYIVMEYVGGQSL. . . . . . . . KQKLPVAEAIAYLLEILPALSY
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   211........220.........230.........240 .........250.........260..
 
   358.360.........370.........380.........390.........400.........410.......
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Query Sequence  IERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF
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Template Sequence  LHSIGLVYNDLKPENIMLT. EEQLKLIDLGAVSRINSF. . . . . GYLYGTPGFQAPEIVRT
Template Known Secondary structure  TT



SGGG
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   267..270.........280..... ....290.........300... ......310.........320
 
   418.420.........430.........440.........450.........460.........470.......
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Query Sequence  GCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIMK
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Template Sequence  GP. TVATDIYTVGRTLAALTL. DLPTRNGRYVDGL. . . . . . . PEDDPVLKTYDSYGRLLR
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   321. .......330.........340 .........350... ......360.........370.
 
   478.480....... ..490.........500..
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Query Sequence  MCWKEKAEER. PTFDYLQSVLDDFYT
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Template Sequence  RAIDPDPRQRFTTAEEMSAQLTGVLR
Template Known Secondary structure  T
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   372.......380.........390.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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