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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank285Aligned Residues267
% Identity22%Templatec2ojiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 1; PDBTitle: crystal structure of erk2 in complex with n-benzyl-4-(4-(3-2 chlorophenyl)-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270. ........280... ......290......
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Query Sequence  WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTK. VAVKTLKPGTMS. . VQAFLEEANLMKT
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Template Sequence  FDVG. PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR
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.SSTTTTTT

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   17..20 .........30.........40.........50.........60.........70.....
 
   297..300.........310... ......320.........330.........340.........350.
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Query Sequence  LQHDKLVRLYAVVTKEE. . . . . PIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI
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Template Sequence  FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT. . . . QHLSNDHICYFLYQI
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   76...80.........90.........100.........110...... ...120.........130.
 
   352.......360.........370.........380.........390.........400....... .
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Query Sequence  AEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI. . . K
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Template Sequence  LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY
Template Known Secondary structure  TT




GGG
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GGG
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GGG
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   132.......140.........150.........160.........170.........180.........190.
 
   409410.........420.........430.........440.........450.........460.....
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Query Sequence  WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRM. . .
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Template Sequence  RAPEIMLNSKGYTKSIDIWSVGCILAEMLS. NRPIFPGKHYLDQLNHILGILGSPSQEDL
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   192.......200.........210.........220. ........230.........240.........250
 
   466...470.........480.........490..... .
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . ENCPDELYDIMKMCWKEKAEERPTFDYLQS. . V
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Template Sequence  NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY
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   251........260.........270.........280.........290.........300.........310
 
   497..500.........510..
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Query Sequence  LDDFYTATEGQYQQQP
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Template Conservation 
               
Template Sequence  LEQYYDPSDEPIAEAP
Template Known Secondary structure  GTTT

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   311........320......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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