Return to main results Retrieve Phyre Job Id

Job DescriptionP25911
Confidence99.87%DateWed Jul 10 14:04:52 BST 2013
Rank385Aligned Residues110
% Identity24%Templatec2dlzA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:protein vav-2; PDBTitle: solution structure of the sh2 domain of human protein vav-2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140.........150.........160.......
Predicted Secondary structure 




































Query SS confidence 



























































Query Sequence  KREGFIPSNYVAKVNTLETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSL
Query Conservation     
  
   
    


   



 
 
  

  
       
 



 
    
 
 
Alig confidence 










....






















..



















Template Conservation    
        .... 
    

 
 


  

 

  ..   
 



 
        
Template Sequence  GSSGSSGSREI. . . . DYTAYPWFAGNMERQQTDNLLKS. . HASGTYLIRERPAEAERFAI
Template Known Secondary structure 


S


S


....
GGGSTTS

..S
TTB

S
SS

Template Predicted Secondary structure 










....













..









Template SS confidence 



























































   1........10. ........20.........30.... .....40.........50....
 
   168.170.........180.........190.........200.........210..... ....220..
Predicted Secondary structure 






















.....






Query SS confidence 















































. . . . .






Query Sequence  SVRDYDPMHGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQKQS. . . . . DGLCRRL
Query Conservation 

          
 
  
     
         
 

  

  
    ..... 

   
Alig confidence 


.....












.

























.....






Template Conservation 

 .....      
  
   .     
     
 

  

  
    
      
   
Template Sequence  SIK. . . . . FNDEVKHIKVVEK. DNWIHITEAKKFDSLLELVEYYQCHSLKESFKQLDTTL
Template Known Secondary structure  .....
SSS.TTSTTS

BSSTTS
TTTT
TT




Template Predicted Secondary structure  .....



.

















Template SS confidence 



























































   55.. ..60.........70 .........80.........90.........100........
 
   223......
Predicted Secondary structure 






Query SS confidence 






Query Sequence  EKACISP
Query Conservation         
Alig confidence 






Template Conservation    

  
Template Sequence  KYPYSGP
Template Known Secondary structure 
B

S

Template Predicted Secondary structure 






Template SS confidence 






   109110.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D