Return to main results Retrieve Phyre Job Id

Job DescriptionP25911
Confidence99.68%DateWed Jul 10 14:04:52 BST 2013
Rank451Aligned Residues80
% Identity25%Templatec2csqA_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:rim binding protein 2; PDBTitle: solution structure of the second sh3 domain of human rim-2 binding protein 2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70........ .80.........90.........100
Predicted Secondary structure 
























........












Query SS confidence 





























. . . . . . . .





















Query Sequence  HLLPGQRFQTKDPEEQGDIVVALYPYDGIH. . . . . . . . PDDLSFKKGEKMKVLEEHGEWW
Query Conservation                       

  
    ........  


   

   
      

Alig confidence 





























........





















Template Conservation 


  
   
     
     




              



  

 
 
        
Template Sequence  GSSGSSGTDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADG
Template Known Secondary structure 


SSSSS


S





SS
B
TTTTSS
TTB

B
TT

TT
Template Predicted Secondary structure 











































Template SS confidence 



























































   1........10.........20.........30.........40.........50.........60
 
   101........110.........120........
Predicted Secondary structure 


















Query SS confidence 



























Query Sequence  KAKSLSSKREGFIPSNYVAKVNTLETEE
Query Conservation            
  
   
    


   
Alig confidence 



























Template Conservation 
      
  
 

 


          
Template Sequence  FYRGETCARLGLIPCNMVSEIQADDEEM
Template Known Secondary structure  TTTTTS



S


Template Predicted Secondary structure 












Template SS confidence 



























   61........70.........80........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D