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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank98Aligned Residues247
% Identity24%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   245....250.........260....... ..270.........280.........290.........300...
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Query Sequence  ESIKLVKKLGAGQFGEVWMGYYN. NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLV
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRCP. ENIKKEICINKMLNHENVV
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   7..10.........20.........30.........40...... ...50.........60.....
 
   304.....310.........320.........330.........340.........350.........360...
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Query Sequence  RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY
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Template Sequence  KFYGHRREGNIQYLFLEYCSGGELFDRI. . EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI
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STT


TTGGGGS..BTTTB

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   6970.........80.........90...... ...100.........110.........120......
 
   364.....370.........380.........390.........400.... .....410.........420 .
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Query Sequence  IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAK. FPIKWTAPEAINFGCF. T
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Template Sequence  THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA
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SGGG
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TT

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B
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   127..130.........140.........150.........160.........170.........180......
 
   422.......430.........440.........450....... ..460.........470.........
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Query Sequence  IKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALS. . QGYRMPRMENCPDELYDIMKMC
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Template Sequence  EPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI
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S
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TT
TTSTTGGGT
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   187..190.........200... ......210.........220.........230.........240.....
 
   480.........490.....
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Query Sequence  WKEKAEERPTFDYLQS
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Template Sequence  LVENPSARITIPDIKK
Template Known Secondary structure  S
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   246...250.........260.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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