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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank106Aligned Residues247
% Identity22%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   244.....250.........260....... ..270.........280...... ...290.........
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Query Sequence  RESIKLVKKLGAGQFGEVWMGYYN. NSTKVAVKTLKPGTMSVQA. . . FLEEANLMKTLQH
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH
Template Known Secondary structure  TTTTTTTT


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   10.........20.........30.........40.........50.........60.........
 
   300.........310.........320.........330.........340.........350.........
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Query Sequence  DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE
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Template Sequence  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDI. . VAREFYSEADASHCIQQILESIAYCH
Template Known Secondary structure  TTB


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S
B..TT
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   70.........80.........90.........100. ........110.........120.......
 
   360.........370...... ...380.........390.........400.........410......
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Query Sequence  RKNYIHRDLRAANVLVS. . . ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN
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Template Sequence  SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF. . AGTPGYLSPEVLK
Template Known Secondary structure  TT
B



SGGGS
SSTT




TT
B

TT

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S..
S
GGG

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   128.130.........140.........150.........160.........170.. .......180.....
 
   417..420.........430.........440.........450.........460. ........470...
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Query Sequence  FGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYR. . . MPRMENCPDELY
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Template Sequence  KDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK
Template Known Secondary structure  T

B
T.SS
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TTGGGGS
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   187..190.........200........ .210.........220.........230.........240.....
 
   474.....480.........490.....
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Query Sequence  DIMKMCWKEKAEERPTFDYLQS
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Template Sequence  SLIDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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TT
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   246...250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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