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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank27Aligned Residues251
% Identity20%Templatec2acxB_
PDB info PDB header:transferaseChain: B: PDB Molecule:g protein-coupled receptor kinase 6; PDBTitle: crystal structure of g protein coupled receptor kinase 6 bound to2 amppnp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260........ .270........ .280.........290....
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Query Sequence  WEIPRESIKLVKKLGAGQFGEVWMGYYNN. STKVAVKTLK. . . . PGTMSVQAFLEEANLM
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Template Sequence  QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL
Template Known Secondary structure  S


GGGTTTTT

TT
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   179180.........190.........200.........210.........220.........230........
 
   295....300.........310.........320.........330.........340.........350....
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Query Sequence  KTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEG
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Template Sequence  EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM. . AGFPEARAVFYAAEICCG
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   239240.........250.........260.........270........ .280.........290......
 
   355....360.........370.........380.........390.........400.........410....
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Query Sequence  MAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA
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Template Sequence  LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR. . VGTVGYMAPEV
Template Known Secondary structure  TT



SGGG
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GGG

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   299300.........310.........320.........330.........340..... ....350......
 
   415....420.........430.........440.........450.........460.........470....
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Query Sequence  INFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYD
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Template Sequence  VKNERYTFSPDWWALGCLLYEMIA. GQSPFQQKIKREEVERLVKEVPEEYSERFSPQARS
Template Known Secondary structure  TT
SS.SS
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   357..360.........370.........380 .........390.........400.........410.....
 
   475....480....... ..490.....
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Query Sequence  IMKMCWKEKAEER. . . . . PTFDYLQS
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Template Sequence  LCSQLLCKDPAERLGCRGGSAREVKE
Template Known Secondary structure  S
SSGGGSTTSSSSTT
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   419420.........430.........440....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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