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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank254Aligned Residues241
% Identity18%Templatec2ac5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   245....250.. .......260....... ..270....... ..280.........290....... ..300
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Query Sequence  ESIKLVKK. LGAGQFGEVWMGYYN. NSTKVAVKTL. KPGTMSVQAFLEEANLMKTL. QHD
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Template Sequence  DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHR
Template Known Secondary structure  GS
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   81........90.........100.........110.........120.........130.........140
 
   301........310.........320.........330.........340.........350.........360
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Query Sequence  KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER
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Template Sequence  NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR. . RHFNELEASVVVQDVASALDFLHN
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   141........150.........160.........170.... .....180.........190........
 
   361........370.........380.........390.........400.........410.........420
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Query Sequence  KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF
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Template Sequence  KGIAHRDLKPENILCEH. . . . . . . PNQVSPVKICDFGPCGSAEYMAPEVVEAFSEEASIY
Template Known Secondary structure  TT


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   199200.........210..... ....220.........230.........240.........250.
 
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Query Sequence  TIKSDVWSFGILLYEIVTYGKIPYPGRT. . . . . . . . . . . NADVMSALSQGYRMPRM. . . E
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Template Sequence  DKRCDLWSLGVILYILLS. GYPPFVGRCGSDCGWACPACQNMLFESIQEGKYEFPDKDWA
Template Known Secondary structure  TT.SS
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   273......280.........290 .........300.........310.........320.........330.
 
   467..470.........480.........490.....
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Query Sequence  NCPDELYDIMKMCWKEKAEERPTFDYLQS
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Template Sequence  HISCAAKDLISKLLVRDAKQRLSAAQVLQ
Template Known Secondary structure  TS
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   336...340.........350.........360....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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