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Job DescriptionP25911
Confidence100.00%DateWed Jul 10 14:04:52 BST 2013
Rank144Aligned Residues248
% Identity20%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.........260........ .270........ .280.........290......
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Query Sequence  IPRESIKLVKKLGAGQFGEVWMGYYNN. STKVAVKTLK. . . . PGTMSVQAFLEEANLMKT
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ
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STT
SSTTT

GGG

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   240.........250.........260.........270.........280.........290.........
 
   297..300.........310.........320.........330.........340.........350.....
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Query Sequence  . LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM
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Template Sequence  ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ. . RKLPEEHARFYSAEISLAL
Template Known Secondary structure  TTSSTTB


B
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   300.........310.........320.........330........ .340.........350.......
 
   356...360.........370.........380.........390.........400.........410.....
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Query Sequence  AYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI
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Template Sequence  NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG. . DTTSFCGTPNYIAPEIL
Template Known Secondary structure  TT
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GGG
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TT
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GGG

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   358.360.........370.........380.........390........ .400.........410.....
 
   416...420.........430.........440.........450.........460.........470.....
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Query Sequence  NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDI
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Template Sequence  RGEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILE. KQIRIPRSMSVKAASV
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   417..420.........430......... 440.........450........ .460.........470....
 
   476...480......... 490.....
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Query Sequence  MKMCWKEKAEERPT. . . . . . FDYLQS
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Template Sequence  LKSFLNKDPKERLGCLPQTGFADIQG
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   484.....490.........500.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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