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Job DescriptionP25911
Confidence99.94%DateWed Jul 10 14:04:52 BST 2013
Rank327Aligned Residues136
% Identity25%Templatec1tqmA_
PDB info PDB header:ribosomeChain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of a. fulgidus rio2 serine protein kinase bound to2 amppnp
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   247..250.........260.........270.........280...... ...290.........300
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Query Sequence  IKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA. . . . . . FLEEANLMKTLQHD
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Template Sequence  DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVKVKEHFSVLAIRSARNEFRALQKLQGL
Template Known Secondary structure  S
SSTTT






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   92.......100.........110.........120.........130.........140.........150.
 
   301........310.........320.........330.........340.........350.........360
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Query Sequence  KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER
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Template Sequence  AVPKVYAWEGN. . . . AVLMELIDAKEL. . . . . . . . . YRVRVENPDEVLDMILEEVAKFYH
Template Known Secondary structure  SS

TT....



G.........GG


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   165....170..... ....180....... ..190.........200.........210.
 
   361........370.........380.........390......
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Query Sequence  KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE
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Template Sequence  RGIVHGDLSQYNVLVSEEG. IWIIDFPQSVEVGEEG
Template Known Secondary structure  TT
SS

TTTTT.


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   212.......220.........230 .........240......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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