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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank264Aligned Residues239
% Identity25%Templated1ob3a_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290.........300. ........310.........320.....
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Query Sequence  SELAFVKEIGSGQFGVVHLGEWRAHIPVAIKAI. . . NEGSMSEEDFIEEAKVMMKLSHSR
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Template Sequence  EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN
Template Known Secondary structure 
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SSGGG


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   2.......10.........20.........30.........40.........50.........60.
 
   326...330.........340.........350.........360.........370.........380.....
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Query Sequence  LVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLERSC
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Template Sequence  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG. GLESVTAKSFLLQLLNGIAYCHDRR
Template Known Secondary structure  B


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   62.......70.........80.........90..... ....100.........110.........120
 
   386...390.........400.........410.........420.........430.........440.....
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Query Sequence  YIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNKYSS
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Template Sequence  VLHRDLKPQNLLINREGELKIADFGLARAFGIVTLW. . . . . . . . . YRAPDVLMGSKKYST
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S


GGG
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T.........T

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   121........130.........140.........150...... ...160.........170.
 
   446...450.........460.........470.........480....
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Query Sequence  KSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFR. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TIDIWSVGCIFAEMVN. GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT
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TTTSTTGGGSTT

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   181........190...... ...200.........210.........220.........230.........
 
   485....490.........500.........510........
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Query Sequence  . . . . . . . LYRPHLAPMTIYRVMYSCWHESPKGRPTFAELLQ
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Template Sequence  VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE
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GGGT

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   240.........250.........260.........270.........280
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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