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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank115Aligned Residues247
% Identity23%Templated1koba_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290. ........300... ......310.........320......
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Query Sequence  SELAFVKEIGSGQFGVVHLGEWR. AHIPVAIKAINE. GSMSEEDFIEEAKVMMKLSHSRL
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Template Sequence  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL
Template Known Secondary structure  GTTTTTT



STT

STTB
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   51........60.........70.........80.........90.........100.........110
 
   327..330.........340.........350.........360.........370.........380......
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Query Sequence  VQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLERSCY
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Template Sequence  INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI
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BTT
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   111........120.........130.........140.........150.........160.........170
 
   387..390......... 400.........410.........420.........430.........440....
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Query Sequence  IHRDLAARNCLVS. . SACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNKYS
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Template Sequence  VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA. . TAEFAAPEIVDREPVG
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GGGSSTT





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TTS

S..SGGG

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   171........180.........190.........200.........210.. .......220........
 
   445....450.........460.........470.........480... ......490.........500.
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Query Sequence  SKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGF. . . RLYRPHLAPMTIYRVMYS
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Template Sequence  FYTDMWAIGVLGYVLLS. GLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN
Template Known Secondary structure  .S

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SSTTTTS
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   229230.........240..... ....250.........260.........270.........280.......
 
   502.......510........
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Query Sequence  CWHESPKGRPTFAELLQ
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Template Sequence  LLQKEPRKRLTVHDALE
Template Known Secondary structure  TS
SSGGGS

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   288.290.........300....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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