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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank123Aligned Residues247
% Identity21%Templated1koaa2
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution3.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290. ........300... ......310.........320......
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Query Sequence  SELAFVKEIGSGQFGVVHLGEWR. AHIPVAIKAINE. GSMSEEDFIEEAKVMMKLSHSRL
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Template Sequence  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL
Template Known Secondary structure  GTTTTTTT


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TTB
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   5940.........5950.........5960.........5970.........5980.........5990.........
 
   327..330.........340.........350.........360.........370.........380......
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Query Sequence  VQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLERSCY
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Template Sequence  VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY
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   6000.........6010.........6020.........6030.........6040.........6050.........
 
   387..390......... 400.........410.........420.........430.........440....
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Query Sequence  IHRDLAARNCLVS. . SACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNKYS
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Template Sequence  VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT. . TGTAEFAAPEVAEGKPVG
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GGGSSTTS




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   6060.........6070.........6080.........6090......... 6100.........6110.......
 
   445....450.........460.........470.........480.... .....490.........500.
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Query Sequence  SKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFR. . . LYRPHLAPMTIYRVMYS
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Template Sequence  YYTDMWSVGVLSYILLS. GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK
Template Known Secondary structure  .SS
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GGGGG

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   6118.6120.........6130.... .....6140.........6150.........6160.........6170......
 
   502.......510........
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Query Sequence  CWHESPKGRPTFAELLQ
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Template Sequence  LLLADPNTRMTIHQALE
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SSGGGS

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   6177..6180.........6190...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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