Job Description P42682 Confidence 100.00% Date Tue Jul 30 13:16:14 BST 2013 Rank 7 Aligned Residues 371 % Identity 33% Template c4fl2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:tyrosine-protein kinase syk; PDBTitle: structural and biophysical characterization of the syk activation2 switch Resolution 2.19 Å Model Dimensions (Å) X:62.485 Y:96.720 Z:53.130

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		L	E	I	Y	E	W	Y	H	K	N	I	T	R	N	Q	T	E	R	L	L	R	Q	.	E	A	K	E	G	A	F	I	V	R	D	S	R	H	L	G	S	Y	T	I	S	V	F	T	R	A	R	R	H	T	Q	S	S	I	K	H	Y
Query Conservation																								.
Alig confidence																								.																									.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		H	E	K	M	P	W	F	H	G	K	I	S	R	E	E	S	E	Q	I	V	L	I	G	S	K	T	N	G	K	F	L	I	R	A	R	D	N	N	G	S	Y	A	L	C	L	L	H	.	.	.	.	.	.	E	G	K	V	L	H	Y
Template Known Secondary structure		G	G	G	S	T	T	B			S												S	S	S			T	T									T	T	T									.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.								.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.
Query Sequence		Q	I	K	K	N	D	S	G	Q	W	Y	I	T	E	R	H	L	F	P	S	V	P	E	L	I	Q	Y	H	Q	Y	N	A	A	G	L	I	S	R	L	R	Y	P	I	G	L	L	G	S	C	.	.	.	.	.	.	.	L	P	A	T
Query Conservation																																																			.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	D	K	D	K	T	G	K	L	S	I	P	E	G	K	K	F	D	T	L	W	Q	L	V	E	H	Y	S	Y	K	A	D	G	L	L	R	V	L	T	V	P	C	Q	K	I	G	T	Q	R	E	A	L	P	M	D	T	E	V	Y
Template Known Secondary structure							T	T	S				S	T	T				B	S	S									T	T	B		T	T	S	S	S				S	B				S				T	T			G	G	G	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.									.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.																		.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.																		.	.	.
Query Sequence		S	G	F	S	Y	E	K	W	E	I	D	P	S	E	L	A	F	V	K	E	.	.	.	.	.	.	.	.	I	G	S	G	Q	F	G	V	V	H	L	G	E	W	R	A	H	.	.	.	I	P	V	A	I	K	A	I	N	E	G	S
Query Conservation																						.	.	.	.	.	.	.	.																		.	.	.
Alig confidence																						.	.	.	.	.	.	.	.																		.	.	.
Template Conservation
Template Sequence		E	S	P	Y	A	D	P	E	E	I	R	P	K	E	V	Y	L	D	R	K	L	L	T	L	E	D	K	E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A
Template Known Secondary structure		S		G	G	G	S	T	T	S				S	S	S	B			G	G	G												T	T											T	T												S	G	G
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		306	.				.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		M	S	.	.	.	E	E	D	F	I	E	E	A	K	V	M	M	K	L	S	H	S	R	L	V	Q	L	Y	G	V	C	I	Q	Q	K	P	L	Y	I	V	T	E	F	M	E	N	G	C	L	L	D	Y	L	R	E	R	K	G	Q	L
Query Conservation				.	.	.
Alig confidence				.	.	.																											.																										.
Template Conservation																																	.																										.
Template Sequence		N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	L	D	N	P	Y	I	V	R	M	I	G	I	C	.	E	A	E	S	W	M	L	V	M	E	M	A	E	L	G	P	L	N	K	Y	L	Q	Q	N	R	.	H	V
Template Known Secondary structure		G		G	G	G																	T	T	B								.		S	S	S									T	T		B									T	.	T	S
Template Predicted Secondary structure																																	.																										.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.		.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.			420
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		Q	K	A	L	L	L	S	M	C	Q	D	I	C	E	G	M	A	Y	L	E	R	S	C	Y	I	H	R	D	L	A	A	R	N	C	L	V	S	S	A	C	V	V	K	I	S	D	F	G	M	A	R	Y	V	L	D	D	E	.	.	Y
Query Conservation																																																											.	.
Alig confidence																																																											.	.
Template Conservation
Template Sequence		K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y	Y
Template Known Secondary structure																							T	T				S			S	G	G	G						T	T							T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	S	S	G	A	K	F	P	V	K	W	C	P	P	E	V	F	H	F	N	K	Y	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	V	F	T	E	G	K	M	P	F	E	N	K	S	N	L	Q	V	V	E	A	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	Q	T	H	G	K	W	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E
Template Known Secondary structure			S		B	T	T	B		G	G	G	G																													T	T	T			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	F	R	L	Y	R	P	H	L	A	P	M	T	I	Y	R	V	M	Y	S	C	W	H	E	S	P	K	G	R	P	T	F	A	E	L	L	Q	V	L	T	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	E	R	M	G	C	P	A	G	C	P	R	E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	A	A	V	E	L	R	L	R	N	Y
Template Known Secondary structure		T	T							T	T													T		S	S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D