Job Description P42682 Confidence 100.00% Date Tue Jul 30 13:16:14 BST 2013 Rank 43 Aligned Residues 248 % Identity 39% Template c4aojA_ PDB info PDB header:transferase Chain: A: PDB Molecule:high affinity nerve growth factor receptor; PDBTitle: human trka in complex with the inhibitor az-23 Resolution 2.75 Å

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		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.				.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.												.
Query SS confidence																															.	.	.												.
Query Sequence		W	E	I	D	P	S	E	L	A	F	V	K	E	I	G	S	G	Q	F	G	V	V	H	L	G	E	W	R	A	.	.	.	H	I	P	V	A	I	K	A	I	N	E	.	G	S	M	S	E	E	D	F	I	E	E	A	K	V	M	M
Query Conservation																															.	.	.												.
Alig confidence																															.	.	.												.
Template Conservation
Template Sequence		H	H	I	K	R	R	D	I	V	L	K	W	E	L	G	E	G	A	F	G	K	V	F	L	A	E	C	H	N	L	L	P	K	M	L	V	A	V	K	A	L	K	E	A	S	E	S	A	R	Q	D	F	Q	R	E	A	E	L	L	T
Template Known Secondary structure			B			G	G	G											S	S									S	S	S												S			S															T
Template Predicted Secondary structure
Template SS confidence
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360				.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		K	L	S	H	S	R	L	V	Q	L	Y	G	V	C	I	Q	Q	K	P	L	Y	I	V	T	E	F	M	E	N	G	C	L	L	D	Y	L	R	E	R	K	G	.	.	.	Q	L	Q	K	A	L	L	L	S	M	C	Q	D	I	C	E
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.
Template Conservation
Template Sequence		M	L	Q	H	Q	H	I	V	R	F	F	G	V	C	T	E	G	R	P	L	L	M	V	F	E	Y	M	R	H	G	D	L	N	R	F	L	R	S	H	G	P	D	P	G	P	L	G	L	G	Q	L	L	A	V	A	S	Q	V	A	A
Template Known Secondary structure		T				T	T	B									S	S	S	S									T	T		B							T	S	S					S
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	A	Y	L	E	R	S	C	Y	I	H	R	D	L	A	A	R	N	C	L	V	S	S	A	C	V	V	K	I	S	D	F	G	M	A	R	Y	V	L	D	D	E	Y	I	S	S	S	G	A	K	F	P	V	K	W	C	P	P	E
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	M	V	Y	L	A	G	L	H	F	V	H	R	D	L	A	T	R	N	C	L	V	G	Q	G	L	V	V	K	I	G	D	F	G	T	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	R	W	M	P	P	E
Template Known Secondary structure									T	T				S				G	G	G					T	T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.																.	.	.	.	.	.	680	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	H	F	N	K	Y	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	V	F	T	E	G	K	M	P	F	E	N	K	S	N	L	Q	V	V	E	A	I	S	Q	G	F	R	L	Y	R	P	H	L	A	P	M	T	I	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	L	Y	R	K	F	T	T	E	S	D	V	W	S	F	G	V	V	L	W	E	I	F	T	Y	G	K	Q	P	W	Y	Q	L	S	N	T	E	A	I	D	C	I	T	Q	G	R	E	L	E	R	P	R	A	C	P	P	E	V	Y
Template Known Secondary structure				T	T																					T	T	S			T	T		S	S												T							T	T
Template Predicted Secondary structure
Template SS confidence
		698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	M	Y	S	C	W	H	E	S	P	K	G	R	P	T	F	A	E	L	L	Q	V	L	T	E	I	A	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	M	R	G	C	W	Q	R	E	P	Q	Q	R	H	S	I	K	D	V	H	A	R	L	Q	A	L	A	Q	A
Template Known Secondary structure										S	S	T	T	T	S																S
Template Predicted Secondary structure
Template SS confidence
		758	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D