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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank266Aligned Residues243
% Identity24%Templatec4accB_
PDB info PDB header:transferaseChain: B: PDB Molecule:glycogen synthase kinase-3 beta; PDBTitle: gsk3b in complex with inhibitor
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   271........280.........290.. .......300.........310.........320.........
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Query Sequence  LAFVKEIGSGQFGVVHLGEWRA. HIPVAIKAINEGSMSEEDFIEEAKVMMKLSHSRLVQL
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Template Sequence  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK. . . RFKNRELQIMRKLDHCNIVRL
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   56...60.........70.........80.........90. ........100.........110..
 
   330........ .340.........350..... ....360.........370.........380.
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Query Sequence  YGVCIQQKP. . . . . . LYIVTEFMENGCLLDYL. . RERKGQLQKALLLSMCQDICEGMAYL
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Template Sequence  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI
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   113......120.........130.........140.........150.........160.........170..
 
   382.......390.........400 .........410.........420.........430.........440
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Query Sequence  ERSCYIHRDLAARNCLVSS. ACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHF
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Template Sequence  HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY. YRAPELIFGA
Template Known Secondary structure  TTT
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SGGG
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SS


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   173......180.........190.........200.........210.........220. ........230.
 
   441........450.........460.........470.........480.......
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Query Sequence  NKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFRLYR. . . . . . . . . . . . .
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Template Sequence  TDYTSSIDVWSAGCVLAELLL. GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE
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T.SS
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   232.......240.........250.. .......260.........270.........280.........290
 
   488.490.........500.........510........
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Query Sequence  . . . . . . . . . . . . . . . PHLAPMTIYRVMYSCWHESPKGRPTFAELLQ
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Template Sequence  FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA
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   291........300.........310.........320.........330......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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