Job Description P42682 Confidence 100.00% Date Tue Jul 30 13:16:14 BST 2013 Rank 283 Aligned Residues 235 % Identity 29% Template c4aaaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cyclin-dependent kinase-like 2; PDBTitle: crystal structure of the human cdkl2 kinase domain Resolution 1.53 Å

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		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.				.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																										.																.	.	.
Query SS confidence																										.																.	.	.
Query Sequence		S	E	L	A	F	V	K	E	I	G	S	G	Q	F	G	V	V	H	L	G	E	W	R	A	.	H	I	P	V	A	I	K	A	I	N	E	G	S	M	S	.	.	.	E	E	D	F	I	E	E	A	K	V	M	M	K	L	S	H	S
Query Conservation																										.																.	.	.
Alig confidence																										.																.	.	.
Template Conservation
Template Sequence		E	K	Y	E	N	L	G	L	V	G	E	G	S	Y	G	M	V	M	K	C	R	N	K	D	T	G	R	I	V	A	I	K	K	F	L	E	S	D	D	D	K	M	V	K	K	I	A	M	R	E	I	K	L	L	K	Q	L	R	H	E
Template Known Secondary structure		G	G							G	G	G	G	T	T	S	S							T	T	T											S		S	S																					T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	V	Q	L	Y	G	V	C	I	Q	Q	K	P	L	Y	I	V	T	E	F	M	E	N	G	C	L	L	D	Y	L	R	E	R	K	G	Q	L	Q	K	A	L	L	L	S	M	C	Q	D	I	C	E	G	M	A	Y	L	E	R	S
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		N	L	V	N	L	L	E	V	C	K	K	K	K	R	W	Y	L	V	F	E	F	V	D	H	T	I	L	D	D	L	E	L	F	P	.	N	G	L	D	Y	Q	V	V	Q	K	Y	L	F	Q	I	I	N	G	I	G	F	C	H	S	H
Template Known Secondary structure		T	B										T	T										S										S	T	.	T																								T
Template Predicted Secondary structure																																				.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440		.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		C	Y	I	H	R	D	L	A	A	R	N	C	L	V	S	S	A	C	V	V	K	I	S	D	F	G	M	A	R	Y	V	L	D	D	E	Y	I	S	S	S	G	A	K	F	P	V	K	W	C	P	P	E	V	F	H	F	.	N	K	Y
Query Conservation																																																										.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	I	H	R	D	I	K	P	E	N	I	L	V	S	Q	S	G	V	V	K	L	C	D	F	G	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	A	T	R	W	Y	R	A	P	E	L	L	V	G	D	V	K	Y
Template Known Secondary structure		T								G	G	G					T	T	S								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.						T	T							T	T		T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.														.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	V	F	T	E	G	K	M	P	F	E	N	K	S	N	L	Q	V	V	E	A	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence		G	K	A	V	D	V	W	A	I	G	C	L	V	T	E	M	F	M	.	G	E	P	L	F	P	G	D	S	D	I	D	Q	L	Y	H	I	M	M	C	L	G	N	L	I	P	R	H	Q	E	L	F	N	K	N	P	V	F	A	G	V
Template Known Secondary structure			T																	.	S	S		S				S	S														S													G	G	G	T	T
Template Predicted Secondary structure																				.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
									481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	Q	G	F	R	L	Y	R	P	H	L	A	P	M	T	I	Y	R	V	M	Y	S	C	W	H	E	S	P	K	G	R	P	T	F	A	E	L	L	Q
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	P	E	I	K	E	R	E	P	L	E	R	R	Y	P	K	L	S	E	V	V	I	D	L	A	K	K	C	L	H	I	D	P	D	K	R	P	F	C	A	E	L	L	H
Template Known Secondary structure							S	S								S	T	T	S												T		S	S	G	G	G	S			G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D