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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank204Aligned Residues235
% Identity26%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   266...270.........280.........290..... ....300.........310.........320....
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Query Sequence  IDPSELAFVKEIGSGQFGVVHLGEWRAHIP. VAIKAINEGSMSEEDFIEEAKVMMKLSHS
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Template Sequence  HDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHP
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   16...20.........30.........40.........50.........60.........70.....
 
   325....330.........340.........350.........360.........370.........380....
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Query Sequence  RLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLERS
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Template Sequence  NIVRFKEVILTPTHLAIVMEYASGGELFERICNA. GRFSEDEARFFFQQLISGVSYAHAM
Template Known Secondary structure  TB


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   76...80.........90.........100......... 110.........120.........130....
 
   385....390.........400. ........410.........420.........430.........440..
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Query Sequence  CYIHRDLAARNCLVSSA. . CVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNK
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Template Sequence  QVAHRDLKLENTLLDGSPAPRLKIADFGY. . . . . . . . . . . . . . . . TPAYIAPEVLLKKEY
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GGG


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   135....140.........150.........160... ......170........
 
   443......450.........460.........470.........480.. .......490.......
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Query Sequence  YSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQG. . . . . FRLYRPHLAPMTIYR
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Template Sequence  DGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH
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   194.....200.........210.. .......220.........230.........240.........250..
 
   498.500.........510........
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Query Sequence  VMYSCWHESPKGRPTFAELLQ
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Template Sequence  LISRIFVADPAKRISIPEIRN
Template Known Secondary structure  S
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   253......260.........270...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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