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Job DescriptionP42682
Confidence100.00%DateTue Jul 30 13:16:14 BST 2013
Rank248Aligned Residues246
% Identity23%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290. ........300.. .......310.........320. .
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Query Sequence  SELAFVKEIGSGQFGVVHLGEWR. AHIPVAIKAIN. . . . EGSMSEEDFIEEAKVMMKL. S
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN
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TTTTT

TTTTT
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   353......360.........370.........380.........390.........400.........410..
 
   323......330.........340.........350.........360.........370.........380..
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Query Sequence  HSRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLE
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Template Sequence  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS. RRFDEARARFYAAEIISALMFLH
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TTB


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   413......420.........430.........440........ .450.........460.........470.
 
   383......390.........400.........410.........420.........430.........440..
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Query Sequence  RSCYIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNK
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Template Sequence  DKGIIYRDLKLDNVLLDHEGHCKLADFGMC. . . . . . . . . . KEGICGTPDYIAPEILQEML
Template Known Secondary structure  TT
B




GGG
TTS



TT
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GGG

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   472.......480.........490.........500. ........510.........520.
 
   443......450.........460.........470.........480.........490.........500..
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Query Sequence  YSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISQGFRLYRPHLAPMTIYRVMYSC
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Template Sequence  YGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILND. EVVYPTWLHEDATGILKSF
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   531........540......... 550.........560......... 570.........580........
 
   503......510.........520.......
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Query Sequence  WHESPKGRPTFAELLQVLTEIAETW
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Template Sequence  MTKNPTMRLGSLTQGGEHAILRHPF
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SSGGGSTTSGGGT
TTSGG
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   589590.........600.........610...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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